Gap genes

The gap genes subdivide the embryo into broad domains. Their (zygotic) expression is regulated by maternal gene products, like Bicoid. In addition, gap genes regulate each other, leading to a refinement of their expression patterns.













Gap genes
Gene
Type - Domains
Function
Links
buttonhead (btd)
transcription factor - zinc finger
transcriptonal activator that regulates the segmentation of the head
cap'n'collar (cnc) transcription factor - basic leucine zipper involved in the segmentation of the head - effects both labral and mandibular structures Interactive Fly
caudal (cad)
transcription factor - homeodomain
plays a role in establishing the posterior domains of the embryo
collier (col) (preferred name: knot (kn))
EBF/Olf-1 homolog, HLH protein required for the formation of the hypopharyngeal lobe,
the proper development of the larval head skeleton, and suppresses vein formation between veins 3 and 4
Interactive Fly
crocodile (croc)
transcription factor - winged helix, forkhead family
establishing the domains of expression for wingless and engrailed in the clypeolabrum,
the anterior most segment of the fly's head
empty spiracles (ems)
transcription factor - homeodomain
required for head + brain development
giant (gt)
transcription factor - basic leucine zipper
gap gene
huckebein (hkb)
transcription factor - zinc finger
gap gene (terminal) limits the extent of mesodermal development - required for proper endoderm formation
hunchback (hb)

transcription factor - zinc finger

gap gene, later required for proper temporal generation of NB sublineages
knirps (kni)
transcription factor - steroid receptor - zinc finger
gap gene, later organizes the development of the second wing vein
Krüppel (Kr)
transcription factor - zinc finger transcriptional repressor
gap gene, later required for proper temporal generation of NB sublineages
orthodenticle (otd)
transcription factor - homeodomain - paired-like
acts in a combinatorial fashion with the cephalic gap genes empty spiracles and buttonhead to assign segmental identities in the head and brain
sloppy paired 1 and sloppy paired 2 (Slp 1, Slp 2) transcription factor - forkhead domain has combined characteristics of a gap, pair rule and segment polarity gene Interactive Fly
tailless (tll)
transcription factor - nuclear receptor - zinc finger
early and transient expression at the posterior pole is required to establish the eighth abdominal segment, telson and posterior gut